BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H12SP1|AL425045
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 928 0.0
>3x_Contig1638
Length = 14042
Score = 928 bits (452), Expect = 0.0
Identities = 664/756 (87%), Gaps = 3/756 (0%)
Strand = Plus / Plus
Query: 2 tggtgcaa-aacaattgcttagattgakaagagaaggatggaacaccgacaacgtgcaag 60
|||||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||
Sbjct: 8075 tggtgcaacaacaattgcttagcttgagaagagacggatggaacaccgacaacgtgcaag 8134
Query: 61 awaccaacgtgttcagcgtaagawccggcaataccgttcaaagcagaaaattyaccgaaa 120
| ||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| |
Sbjct: 8135 acaccaacgtgttcagcgtaagaaccggcaataccgttcaaagcagacaattcaccgaca 8194
Query: 121 ccgaaggtngn-atgataaaggaaatamcctttaatytggggtaaccatyagcagcgtaa 179
|||||||| | |||||| |||| ||| |||||||| ||| |||||||| ||||||||||
Sbjct: 8195 ccgaaggtggtgatgatacaggacataccctttaatctggcgtaaccatcagcagcgtaa 8254
Query: 180 g-wgcgttcaattygttgggattaccagcccatcttatacctgggactttgtagatattg 238
| |||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 8255 gcagcgttcaattcgttggcattaccagcccatctcatacctgggacttcgtagatattg 8314
Query: 239 tttaatagggacaagttgaaatwacctggtagaacaaagatggtttgaaatttgaattgc 298
| ||||||||||||||||||| |||||||||| ||||||||||||||| || || ||||
Sbjct: 8315 tccaatagggacaagttgaaatcacctggtagaccaaagatggtttgaacttcgacttgc 8374
Query: 299 tttaattttttgaaaaagtaaagaactaatgtaatttkasaaattgtaatttaagttggt 358
|||||| ||| ||| |||||| || |||||||||||| | | ||||||||||||||||||
Sbjct: 8375 tttaatctttcgaacaagtaacgacctaatgtaatttcagacattgtaatttaagttggt 8434
Query: 359 tttgagttgtagttttattcttaatattaatagttaataatataatatstttssstttas 418
|||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||
Sbjct: 8435 tttgagttgtagttttatccttaatattaatagttaatactataatatgtttggctttag 8494
Query: 419 tssatsstttttgasstaattaaaagtatataattdasattatgattaagaaatgatgss 478
| || ||||||| |||| |||||||||||||| | ||||||||||||| ||||||
Sbjct: 8495 tggatggtttttgaggtaatcaaaagtatataattaagattatgattaagacatgatggg 8554
Query: 479 aaactctagccattaaagataattatgcccatgtatttatactttatctgasttaaataa 538
||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 8555 aaactctagccattacagataatcatgcccatgtatttatactttatctgagttaactaa 8614
Query: 539 aaaaaatasaaasskcatattcaacaaccasccasccctgcctctcacctcactctcccc 598
|||||||| ||| |||||||| || ||| ||| |||||||||||||||||||||||||
Sbjct: 8615 aaaaaatagaaaggtcatattcaccacccagccagccctgcctctcacctcactctcccc 8674
Query: 599 ccttaatggataattgacacaactcctactactattccaaccttaacatattcatccccc 658
|||||||||||||||||||||| | |||||||||||||||||||| |||||||| ||
Sbjct: 8675 ccttaatggataattgacacaagtggtactactattccaaccttaagatattcatgggcc 8734
Query: 659 aatactamctatamaccttaaaaccttcaatcttttyacaaatattscataatctatycc 718
||||||| |||| ||||||||| || |||||||| ||||||||| |||||||||| ||
Sbjct: 8735 aatactacgtatacaccttaaaaggttgaatcttttcacaaatattgcataatctatccc 8794
Query: 719 atccttctacataccaaatamacaatatccaaaata 754
|| ||||||||| |||||| | ||||| |||||||
Sbjct: 8795 atggttctacatagcaaatacagaatatgcaaaata 8830
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4987
Number of Sequences: 1807
Number of extensions: 4987
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.7 bits)
S1: 11 (23.1 bits)
S2: 49 (101.0 bits)